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Can you please try the latest Cygwin developer snapshot at http://cygwin.com/snapshots/, so we know this isn't fixed by the latest bugfixes.
There's also a new mount option "ihash" since 1.7.6. It might help with the "cp" issue above, but that probably doesn't help with the "mv" issue.
of mv. Would you mind to create an strace under the latest Cygwin developer snapshot, like this:
$ strace -o mv.trace mv somefile newfile
and send us the mv.trace file? This might give a clue where the problem occurs. Maybe we can find a workaround.
Attachment:
mv.trace
Description: Text document
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